Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000006777Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
suox
Cytochrome b5 heme-binding domain-containing protein.
      
 0.580
papss1
Uncharacterized protein.
      
 0.549
papss2
Uncharacterized protein.
      
 0.549
fibcd1
Fibrinogen C-terminal domain-containing protein.
      
 0.535
ENSCMIP00000000403
Ig-like domain-containing protein.
  
 
   0.512
igsf11
Uncharacterized protein.
  
     0.511
fst
Follistatin.
      
 0.463
ENSCMIP00000012484
Uncharacterized protein.
  
     0.458
rprm
Protein reprimo.
      
 0.445
LOC103176693
Uncharacterized protein.
      
 0.431
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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