STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000006795Ion_trans domain-containing protein. (127 aa)    
Predicted Functional Partners:
unc79
Uncharacterized protein.
   
 0.990
ENSCMIP00000004965
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
 
     0.938
LOC103188289
Uncharacterized protein.
 
    
0.908
Scn2b
IGv domain-containing protein.
   
 0.707
wdr35
WD repeat-containing protein 35.
    
 0.640
ift122
WD_REPEATS_REGION domain-containing protein.
   
 0.625
ift140
WD_REPEATS_REGION domain-containing protein.
    
 0.610
wdr19
WD_REPEATS_REGION domain-containing protein.
    
 0.610
cacna2d2
VWFA domain-containing protein.
   
 0.537
cacna2d3
VWFA domain-containing protein.
   
 0.537
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (18%) [HD]