STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000006806Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.846
sdhb
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.829
hadha
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.580
hsdl2
SCP2 domain-containing protein.
  
 0.557
hmgcl
Pyruvate carboxyltransferase domain-containing protein.
  
  
 0.551
hmgcll1
Pyruvate carboxyltransferase domain-containing protein.
  
  
 0.551
hadhb
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.545
ENSCMIP00000021980
Uncharacterized protein.
  
     0.536
adhfe1
Fe-ADH domain-containing protein.
  
 
 0.533
eci1
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.515
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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