Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172755Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
ENSCMIP00000004232
Uncharacterized protein.
 
      0.900
rab11b
Uncharacterized protein.
    
 0.845
Rab11a
Uncharacterized protein.
    
 0.845
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.640
rab3il1
Sec2p domain-containing protein.
    
 0.639
rab3ip
Rab-3A-interacting protein-like protein.
    
 0.639
LOC103174203
Uncharacterized protein.
    
 0.622
LOC103172835
Uncharacterized protein.
    
 0.622
ENSCMIP00000023863
Homeobox domain-containing protein.
    
   0.599
Gsc2
Homeobox protein goosecoid.
    
   0.599
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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