STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103179151Protein kinase domain-containing protein. (651 aa)    
Predicted Functional Partners:
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.740
cdc5l
Cell division cycle 5-like protein.
    
   0.719
rbm39
Uncharacterized protein.
    
 
 0.643
LOC103190239
Uncharacterized protein.
    
 
 0.579
srsf6
Arginine/serine-rich splicing factor 6.
    
 
 0.579
srsf4
RRM domain-containing protein.
    
 
 0.579
LOC103178492
Uncharacterized protein.
    
 
 0.579
LOC103178495
Uncharacterized protein.
    
 
 0.579
snrnp70
U1 small nuclear ribonucleoprotein 70 kDa.
    
 
 0.558
srsf1
Serine/arginine-rich splicing factor 1B.
    
 
 0.551
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (36%) [HD]