Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103179151Protein kinase domain-containing protein. (651 aa)    
Predicted Functional Partners:
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.762
srsf1
Serine/arginine-rich splicing factor 1B.
    
 
 0.752
rbm39
Uncharacterized protein.
    
 
 0.745
prpf38a
Pre-mRNA-splicing factor 38A-like protein.
    
 
 0.661
zrsr2
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.
    
 
 0.647
cdc5l
Cell division cycle 5-like protein.
    
   0.644
srsf2
Splicing factor, arginine/serine-rich 2.
   
 
 0.642
Srsf9
Uncharacterized protein.
    
 
 0.636
snrnp70
U1 small nuclear ribonucleoprotein 70 kDa.
   
 
 0.633
rnps1
RRM domain-containing protein.
   
 
 0.629
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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