Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172762Uncharacterized protein. (235 aa)    
Predicted Functional Partners:
bptf
Uncharacterized protein.
    
 0.922
dpy30
Uncharacterized protein.
    
 
 0.794
hmgxb4
DUF4171 domain-containing protein.
    
 
 0.746
Hmgxb4
Uncharacterized protein.
    
 
 0.746
LOC103178664
Uncharacterized protein.
   
 0.737
LOC103180602
Uncharacterized protein.
   
 0.737
baz1a
Uncharacterized protein.
     
 0.594
baz1b
Uncharacterized protein.
     
 0.587
nkrf
Uncharacterized protein.
      
 0.582
chrac1
Uncharacterized protein.
   
 
  0.567
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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