Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103172197SF4 helicase domain-containing protein. (155 aa)    
Predicted Functional Partners:
polg
POLAc domain-containing protein.
   
 
 0.970
polg2
HGTP_anticodon domain-containing protein.
     
 0.951
polrmt
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 
 0.900
nubpl
Uncharacterized protein.
    
 
 0.898
ssbp1
Single-stranded DNA-binding protein, mitochondrial.
   
 
 0.889
tfam
Uncharacterized protein.
     
 0.840
ptges2
Uncharacterized protein; Belongs to the GST superfamily.
    
   0.817
rmnd1
DUF155 domain-containing protein.
      
 0.798
ENSCMIP00000003474
Uncharacterized protein.
    
   0.766
cpox
Uncharacterized protein.
    
   0.766
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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