Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103190743Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
rufy1
Uncharacterized protein.
      
 0.739
ENSCMIP00000011757
Noggin; Belongs to the noggin family.
      
 0.640
dgke
Diacylglycerol kinase.
      
 0.638
syngr2
Synaptogyrin.
      
 0.628
ca5a
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
      
 0.588
scpep1
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.587
otos
Uncharacterized protein.
      
 0.530
csrp3
Uncharacterized protein.
      
 0.526
akap1
A-kinase anchor protein 1, mitochondrial.
      
 0.476
chst3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.475
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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