Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000006936WD_REPEATS_REGION domain-containing protein. (295 aa)    
Predicted Functional Partners:
becn1
Uncharacterized protein.
    
 
 0.660
tbc1d16
Rab-GAP TBC domain-containing protein.
      
 0.615
atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 
 0.605
wdfy2
Uncharacterized protein.
      
 0.598
fnbp1
Uncharacterized protein.
     
 0.598
ap1s3
Uncharacterized protein.
      
 0.598
LOC103179261
Microtubule-associated proteins 1A/1B light chain 3C-like protein.
    
 
 0.595
map1lc3a
Uncharacterized protein.
    
 
 0.595
gabarapl2
Uncharacterized protein.
    
 
 0.595
map1lc3b
Uncharacterized protein.
    
 
 0.595
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (16%) [HD]