Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc18Leucine-rich repeat-containing protein 18-like protein. (256 aa)    
Predicted Functional Partners:
cops3
PCI domain-containing protein.
    
 0.623
myadml2
Uncharacterized protein.
      
 0.612
drg2
OBG-type G domain-containing protein.
      
 0.609
lmf1
Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family.
    
 0.600
polr2e
Uncharacterized protein.
    
 
 0.595
ENSCMIP00000006936
WD_REPEATS_REGION domain-containing protein.
    
 
 0.590
atp6v1e1
Putative ATPase H+ transporting lysosomal V1 subunit E isoform 1.
      
 0.587
LOC103181114
LRRCT domain-containing protein.
  
     0.526
ENSCMIP00000005698
LRRCT domain-containing protein.
  
     0.524
LOC103173273
Uncharacterized protein.
  
     0.520
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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