STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172223Serine/arginine-rich splicing factor 3. (167 aa)    
Predicted Functional Partners:
srsf2
Splicing factor, arginine/serine-rich 2.
   
0.996
srsf1
Serine/arginine-rich splicing factor 1B.
   
0.982
ENSCMIP00000031900
RRM domain-containing protein.
   
 0.981
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.977
eif4a3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.976
nxf1
NTF2 domain-containing protein.
    
 0.955
dhx38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like protein.
    
 0.937
cdc40
WD_REPEATS_REGION domain-containing protein.
     
 0.936
ENSCMIP00000004245
RRM domain-containing protein.
   
0.934
srsf7
Serine/arginine-rich splicing factor 7-like protein.
   
 0.934
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (34%) [HD]