Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
fut7Glyco_tran_10_N domain-containing protein. (339 aa)    
Predicted Functional Partners:
st3gal6
Type 2 lactosamine alpha-2,3-sialyltransferase; Belongs to the glycosyltransferase 29 family.
     
 0.915
Fut4
Glyco_tran_10_N domain-containing protein.
  
  
 
0.904
st8sia1
Alpha2,8-sialyltransferase ST8Sia I; Belongs to the glycosyltransferase 29 family.
     
 0.902
LOC103189126
Glyco_trans_2-like domain-containing protein.
     
  0.900
ENSCMIP00000047349
Glyco_trans_2-like domain-containing protein.
     
  0.900
tcf19
FHA domain-containing protein.
      
 0.698
paxx
Uncharacterized protein.
      
 0.644
abca2
Uncharacterized protein.
      
 0.625
npdc1
Uncharacterized protein.
      
 0.614
ddx39a
Uncharacterized protein.
   
 
 0.471
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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