STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103185856Uncharacterized protein. (695 aa)    
Predicted Functional Partners:
met
Uncharacterized protein.
   
 0.629
ENSCMIP00000043212
Sema domain-containing protein.
   
 0.629
mst1r
Protein kinase domain-containing protein.
   
 0.629
cdc42
Cell division control protein 42-like protein.
    
 0.586
meak7
TLDc domain-containing protein.
      
 0.550
rasa1
Uncharacterized protein.
    
 0.484
LOC103171890
C2 domain-containing protein.
    
 0.479
rasal2
Ras-GAP domain-containing protein.
    
 0.479
ENSCMIP00000028387
Ras-GAP domain-containing protein.
    
 0.479
dab2ip
Uncharacterized protein.
    
 0.479
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (22%) [HD]