Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103185856Uncharacterized protein. (695 aa)    
Predicted Functional Partners:
meak7
TLDc domain-containing protein.
      
 0.684
Evi2a
Uncharacterized protein.
      
 0.636
arhgap8
Uncharacterized protein.
     
 0.629
coq5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
      
 0.625
ENSCMIP00000010522
Erf4 domain-containing protein.
      
 0.601
smim24
Uncharacterized protein.
      
 0.587
rnf10
RING-type domain-containing protein.
      
 0.587
agfg1
Arf-GAP domain-containing protein.
      
 0.586
ENSCMIP00000039931
Uncharacterized protein.
      
 0.553
dock10
Uncharacterized protein; Belongs to the DOCK family.
   
 0.518
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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