Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172784Uncharacterized protein. (419 aa)    
Predicted Functional Partners:
arsa
Sulfatase domain-containing protein.
      
 0.692
gcnt4
Uncharacterized protein.
      
 0.662
inpp5d
SH2 domain-containing protein.
      
 0.628
ate1
Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.
      
 0.616
lrrc25
Leucine-rich repeat-containing protein 25-like protein.
      
 0.590
LOC103182802
Uncharacterized protein.
      
 0.590
tinagl1
Tubulointerstitial nephritis antigen-like protein; Belongs to the peptidase C1 family.
      
 0.588
tafa5
Uncharacterized protein.
      
 0.587
dtymk
Thymidylate_kin domain-containing protein.
      
 0.526
LOC103182142
Sialidase domain-containing protein.
      
 0.471
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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