Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103189420Uncharacterized protein. (1659 aa)    
Predicted Functional Partners:
pofut2
Uncharacterized protein.
     
 0.642
adamts13
Peptidase M12B domain-containing protein.
     
 0.527
b3glct
Uncharacterized protein.
    
 0.524
adamts10
Uncharacterized protein.
     
 0.502
adamts6
Uncharacterized protein.
     
 0.502
neo1
Uncharacterized protein.
    
 
 0.497
dcc
Uncharacterized protein.
    
 
 0.497
igdcc4
Uncharacterized protein.
    
 
 0.497
cdh13
Uncharacterized protein.
      
 0.471
adamts15
Peptidase M12B domain-containing protein.
     
 0.466
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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