Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103172802SWIRM domain-containing protein. (384 aa)    
Predicted Functional Partners:
smarcb1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.950
pbrm1
Uncharacterized protein.
   
 0.938
smarce1
HMG box domain-containing protein.
   
 0.933
brd9
Bromo domain-containing protein.
   
 0.917
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.909
phf10
Uncharacterized protein.
    
 0.908
LOC103183838
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2.
   
 0.907
smarcc1
Uncharacterized protein.
  
  
 
0.902
ENSCMIP00000006063
SWIRM-assoc_2 domain-containing protein.
 
      0.899
brd7
Bromo domain-containing protein.
   
 0.897
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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