Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sptbn1Spectrin beta chain; Belongs to the spectrin family. (2324 aa)    
Predicted Functional Partners:
LOC103190679
Uncharacterized protein.
  
  
 
0.901
Sptbn5
Uncharacterized protein.
     
 
0.900
sptan1
Uncharacterized protein.
   
 0.809
epn2
ENTH domain-containing protein.
   
  
 0.639
Stxbp2
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.628
arpc5l
Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
      
 0.626
clint1
Clathrin interactor 1.
      
 0.626
ctnna1
Uncharacterized protein.
   
 
 0.607
gsn
Uncharacterized protein.
     
 0.598
hspa8
Uncharacterized protein; Belongs to the heat shock protein 70 family.
    
 
 0.565
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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