Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
armh3 | atp6v1c1 | ENSCMIP00000007025 | ENSCMIP00000008656 | DUF1741 domain-containing protein. | V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | 0.596 |
armh3 | bloc1s2 | ENSCMIP00000007025 | ENSCMIP00000005668 | DUF1741 domain-containing protein. | Uncharacterized protein. | 0.449 |
armh3 | cnot10 | ENSCMIP00000007025 | ENSCMIP00000033175 | DUF1741 domain-containing protein. | Uncharacterized protein. | 0.448 |
armh3 | nol7 | ENSCMIP00000007025 | ENSCMIP00000017570 | DUF1741 domain-containing protein. | NUC129 domain-containing protein. | 0.448 |
atp6v1c1 | armh3 | ENSCMIP00000008656 | ENSCMIP00000007025 | V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. | DUF1741 domain-containing protein. | 0.596 |
bloc1s2 | armh3 | ENSCMIP00000005668 | ENSCMIP00000007025 | Uncharacterized protein. | DUF1741 domain-containing protein. | 0.449 |
cnot10 | armh3 | ENSCMIP00000033175 | ENSCMIP00000007025 | Uncharacterized protein. | DUF1741 domain-containing protein. | 0.448 |
cnot10 | nol7 | ENSCMIP00000033175 | ENSCMIP00000017570 | Uncharacterized protein. | NUC129 domain-containing protein. | 0.585 |
nol7 | armh3 | ENSCMIP00000017570 | ENSCMIP00000007025 | NUC129 domain-containing protein. | DUF1741 domain-containing protein. | 0.448 |
nol7 | cnot10 | ENSCMIP00000017570 | ENSCMIP00000033175 | NUC129 domain-containing protein. | Uncharacterized protein. | 0.585 |