Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
armh3DUF1741 domain-containing protein. (646 aa)    
Predicted Functional Partners:
Pi4kb
PIK helical domain-containing protein.
    
 
 0.672
ENSCMIP00000005077
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.672
ENSCMIP00000005899
Uncharacterized protein.
    
 
 0.672
nol7
NUC129 domain-containing protein.
      
 0.651
cnot10
Uncharacterized protein.
      
 0.651
relch
LisH domain-containing protein.
      
 0.617
atp6v1c1
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.590
acbd3
Uncharacterized protein.
      
 0.537
bloc1s2
Uncharacterized protein.
      
 0.485
fbxw4
WD_REPEATS_REGION domain-containing protein.
      
 0.485
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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