STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172810PH domain-containing protein. (414 aa)    
Predicted Functional Partners:
ENSCMIP00000040974
Uncharacterized protein.
 
     0.948
LOC103190679
Uncharacterized protein.
 
     0.930
ENSCMIP00000004600
Calponin-homology (CH) domain-containing protein.
 
      0.889
LOC103173342
Uncharacterized protein.
 
     0.875
sptan1
Uncharacterized protein.
   
0.812
LOC103173866
Uncharacterized protein.
 
     0.737
itsn2
Uncharacterized protein.
     
 0.614
LOC103190613
Uncharacterized protein.
 
  
  0.521
actn2
Uncharacterized protein.
 
  
  0.477
itsn1
Uncharacterized protein.
     
 0.466
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.