Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpr153Uncharacterized protein. (518 aa)    
Predicted Functional Partners:
tprg1l
HSac2 domain-containing protein.
    
 0.741
ddx51
Uncharacterized protein.
   
 0.738
eno1
Uncharacterized protein.
   
 
 0.699
usp32
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 
 0.693
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
      
 0.692
arhgef16
Uncharacterized protein.
   
  
 0.690
mysm1
Uncharacterized protein.
   
 0.683
acot7
Uncharacterized protein.
      
 0.678
wrap73
Uncharacterized protein.
      
 0.676
ppih
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.668
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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