Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000007100Uncharacterized protein. (383 aa)    
Predicted Functional Partners:
ENSCMIP00000018724
Uncharacterized protein.
  
 
  0.513
ENSCMIP00000028763
annotation not available
  
 
  0.502
ENSCMIP00000000512
annotation not available
  
 
  0.487
ENSCMIP00000015681
Uncharacterized protein.
  
 
  0.482
ENSCMIP00000041048
Uncharacterized protein.
  
 
  0.480
ENSCMIP00000035509
annotation not available
  
 
  0.479
ENSCMIP00000041051
Uncharacterized protein.
  
 
  0.467
ENSCMIP00000045678
Uncharacterized protein.
  
 
  0.452
ENSCMIP00000041040
Uncharacterized protein.
  
 
  0.450
ENSCMIP00000007534
Uncharacterized protein.
  
 
  0.439
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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