Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hgdUncharacterized protein. (458 aa)    
Predicted Functional Partners:
hpd
4-hydroxyphenylpyruvate dioxygenase.
  
 0.998
LOC103174016
GST C-terminal domain-containing protein.
 
 
 0.991
hpdl
Uncharacterized protein.
  
 0.967
gstz1
GST N-terminal domain-containing protein.
 
 
 0.928
ENSCMIP00000033621
Uncharacterized protein.
  
 0.922
fah
Fumarylacetoacetase.
  
 
 0.898
pah
Uncharacterized protein.
  
  
 0.837
LOC103186674
Uncharacterized protein.
  
 
 0.834
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
  
 0.769
LOC103187775
Fumarylacetoacetate hydrolase domain-containing protein 2A-like protein.
  
 
 0.741
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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