Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
trmt112Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
n6amt1
MTS domain-containing protein.
    
 0.998
bud23
Uncharacterized protein.
   
 0.995
trmt11
UPF0020 domain-containing protein.
   
 0.983
mettl5
MTS domain-containing protein.
    
 
 0.956
mettl27
Methyltransf_25 domain-containing protein.
   
 0.955
alkbh8
Uncharacterized protein.
   
 
 0.948
thumpd3
THUMP domain-containing protein.
    
 
 0.940
trmt12
SAM_MT_TRM5_TYW2 domain-containing protein.
   
 
 0.923
dimt1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.887
trmt9b
Methyltransf_11 domain-containing protein.
   
 0.872
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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