Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000007152Uncharacterized protein. (67 aa)    
Predicted Functional Partners:
grap
GRB2-related adapter protein.
   
 0.528
grap2
Uncharacterized protein.
   
 0.528
grb2
Uncharacterized protein.
   
 0.528
tlnrd1
Uncharacterized protein.
    
 0.502
tln2
Uncharacterized protein.
    
 0.502
tln1
Uncharacterized protein.
    
 0.502
LOC103172049
Uncharacterized protein.
    
 
 0.477
ENSCMIP00000004287
SH2 domain-containing protein.
    
 
 0.477
LOC103172048
PTB domain-containing protein.
    
 
 0.477
ENSCMIP00000007460
Phosphatase tensin-type domain-containing protein.
    
 
 0.477
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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