rabl3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

rabl3

Uncharacterized protein. (251 aa)

Predicted Functional Partners:

hspa9

0.650

hspa4

0.623

hspa4l

0.623

ENSCMIP00000046908

0.623

ENSCMIP00000004945

0.617

hspa5

0.594

ankrd45

0.594

rab24

0.579

sod2

0.576

trap1

0.568

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000004945	rab24	ENSCMIP00000004945	ENSCMIP00000010960	Uncharacterized protein.	Ras-related protein Rab-24.	0.788
ENSCMIP00000004945	rabl3	ENSCMIP00000004945	ENSCMIP00000007156	Uncharacterized protein.	Uncharacterized protein.	0.617
ENSCMIP00000046908	ankrd45	ENSCMIP00000046908	ENSCMIP00000009882	Uncharacterized protein.	Ankyrin repeat domain-containing protein 45-like protein.	0.701
ENSCMIP00000046908	hspa4	ENSCMIP00000046908	ENSCMIP00000026228	Uncharacterized protein.	Uncharacterized protein.	0.717
ENSCMIP00000046908	hspa4l	ENSCMIP00000046908	ENSCMIP00000040034	Uncharacterized protein.	Heat shock 70kDa protein 4-like protein.	0.432
ENSCMIP00000046908	hspa5	ENSCMIP00000046908	ENSCMIP00000008220	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.804
ENSCMIP00000046908	hspa9	ENSCMIP00000046908	ENSCMIP00000047764	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.833
ENSCMIP00000046908	rabl3	ENSCMIP00000046908	ENSCMIP00000007156	Uncharacterized protein.	Uncharacterized protein.	0.623
ENSCMIP00000046908	trap1	ENSCMIP00000046908	ENSCMIP00000016006	Uncharacterized protein.	HATPase_c domain-containing protein.	0.690
ankrd45	ENSCMIP00000046908	ENSCMIP00000009882	ENSCMIP00000046908	Ankyrin repeat domain-containing protein 45-like protein.	Uncharacterized protein.	0.701
ankrd45	hspa4	ENSCMIP00000009882	ENSCMIP00000026228	Ankyrin repeat domain-containing protein 45-like protein.	Uncharacterized protein.	0.701
ankrd45	hspa4l	ENSCMIP00000009882	ENSCMIP00000040034	Ankyrin repeat domain-containing protein 45-like protein.	Heat shock 70kDa protein 4-like protein.	0.701
ankrd45	hspa9	ENSCMIP00000009882	ENSCMIP00000047764	Ankyrin repeat domain-containing protein 45-like protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.739
ankrd45	rabl3	ENSCMIP00000009882	ENSCMIP00000007156	Ankyrin repeat domain-containing protein 45-like protein.	Uncharacterized protein.	0.594
ankrd45	trap1	ENSCMIP00000009882	ENSCMIP00000016006	Ankyrin repeat domain-containing protein 45-like protein.	HATPase_c domain-containing protein.	0.677
hspa4	ENSCMIP00000046908	ENSCMIP00000026228	ENSCMIP00000046908	Uncharacterized protein.	Uncharacterized protein.	0.717
hspa4	ankrd45	ENSCMIP00000026228	ENSCMIP00000009882	Uncharacterized protein.	Ankyrin repeat domain-containing protein 45-like protein.	0.701
hspa4	hspa4l	ENSCMIP00000026228	ENSCMIP00000040034	Uncharacterized protein.	Heat shock 70kDa protein 4-like protein.	0.500
hspa4	hspa5	ENSCMIP00000026228	ENSCMIP00000008220	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.785
hspa4	hspa9	ENSCMIP00000026228	ENSCMIP00000047764	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.839