Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptprfUncharacterized protein. (1918 aa)    
Predicted Functional Partners:
insr
Tyrosine-protein kinase receptor.
    
  0.952
LOC103171770
Ig-like domain-containing protein.
    
 0.951
ctnnb1
Uncharacterized protein.
   
 0.941
LOC103175831
LRRCT domain-containing protein.
    
  0.906
ENSCMIP00000010071
Uncharacterized protein.
    
  0.903
irs1
Uncharacterized protein.
    
  0.903
ENSCMIP00000041019
Uncharacterized protein.
    
  0.903
il1rap
Uncharacterized protein.
    
 0.764
ENSCMIP00000032357
TIR domain-containing protein.
    
 0.764
slitrk1
Uncharacterized protein.
    
 0.650
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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