STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx58Uncharacterized protein. (678 aa)    
Predicted Functional Partners:
ifih1
Uncharacterized protein.
  
0.978
ddx58
Uncharacterized protein.
  
  
 
0.903
LOC103190351
Ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family.
   
 
 0.899
fancl
Uncharacterized protein.
    
 0.825
ENSCMIP00000002845
Uncharacterized protein.
    
 0.808
fancg
Uncharacterized protein.
    
 0.805
fancf
Uncharacterized protein.
    
 0.799
fancb
Uncharacterized protein.
   
 0.798
fancc
Fanconi anemia group C protein-like protein.
    
 0.791
rsad2
Elp3 domain-containing protein.
   
  
 0.723
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.