Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sgpl1Uncharacterized protein. (592 aa)    
Predicted Functional Partners:
sgpp1
acidPPc domain-containing protein.
    
 0.992
ENSCMIP00000042767
acidPPc domain-containing protein.
    
 0.979
plpp2
Phosphatidic acid phosphatase type 2C.
    
 0.968
plpp1
Lipid phosphate phosphohydrolase 1-like protein.
    
 0.966
plpp3
acidPPc domain-containing protein.
    
 0.923
LOC103187548
Uncharacterized protein.
    
 0.905
spns2
MFS domain-containing protein.
      
 0.900
abat
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.739
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 
 0.732
sptlc1
Aminotran_1_2 domain-containing protein.
    
 
 0.644
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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