Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
efl1Tr-type G domain-containing protein. (1150 aa)    
Predicted Functional Partners:
sbds
Uncharacterized protein.
  
 
 0.985
eif6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.931
eef1g
Uncharacterized protein; Belongs to the GST superfamily.
   
 
 0.900
fau
Ubiquitin-like domain-containing protein.
   
 0.856
rpl35
Uncharacterized protein.
  
 0.830
rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.830
Rps11
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.830
rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.830
imp3
IMP3, U3 small nucleolar ribonucleoprotein-like protein.
  
 0.829
rpl23a
60S ribosomal protein L23a-like protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.828
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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