Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mvb12aUncharacterized protein. (267 aa)    
Predicted Functional Partners:
vps37b
Vacuolar protein sorting-associated protein 37B.
   
 0.998
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.997
vps37a
VPS37 C-terminal domain-containing protein.
   
 0.997
tsg101
Uncharacterized protein.
    
 0.995
vps25
Uncharacterized protein.
    
 0.954
mvb12b
Uncharacterized protein.
    
0.939
pdcd6ip
BRO1 domain-containing protein.
   
 
 0.938
cep41
Rhodanese domain-containing protein.
    
   0.920
cep55
EABR domain-containing protein.
    
 
 0.917
ENSCMIP00000026610
VPS37 C-terminal domain-containing protein.
   
 0.913
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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