Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000007284Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
sec63
Translocation protein SEC63-like protein.
   
 
 0.581
emc1
EMC1_C domain-containing protein.
   
 
 0.580
get1
Uncharacterized protein.
    
 
 0.575
ENSCMIP00000007281
Uncharacterized protein.
  
     0.508
LOC103178972
Phosphoglycerate kinase.
   
 
 0.508
spcs2
Uncharacterized protein.
   
   0.504
ENSCMIP00000007286
Uncharacterized protein.
  
     0.482
Atp13a1
Uncharacterized protein.
  
     0.447
Sgsm3
Uncharacterized protein.
      
 0.445
ENSCMIP00000007275
Uncharacterized protein.
  
     0.439
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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