STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103179743TAFH domain-containing protein. (745 aa)    
Predicted Functional Partners:
taf11
TAFII28 domain-containing protein.
    
 0.971
taf12
TFIID_20kDa domain-containing protein.
    
 0.970
taf6
TAF domain-containing protein.
    
 0.966
taf1
Transcription initiation factor TFIID subunit.
   
 0.966
taf8
Transcription initiation factor TFIID subunit 8.
    
 0.965
LOC103177871
Transcription initiation factor TFIID subunit 9.
    
 0.964
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.962
taf2
TBP-associated factor 2.
    
 0.961
taf7
TAFII55_N domain-containing protein.
   
 0.960
taf3
PHD-type domain-containing protein.
    
 0.956
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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