mesd protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mesd

Uncharacterized protein. (153 aa)

Predicted Functional Partners:

lrpap1

0.573

lrp6

0.504

lrp5

0.504

ablim2

0.476

ostm1

0.465

tecpr2

0.435

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ablim2	mesd	ENSCMIP00000022858	ENSCMIP00000007351	Uncharacterized protein.	Uncharacterized protein.	0.476
lrp5	lrpap1	ENSCMIP00000037171	ENSCMIP00000041654	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	Uncharacterized protein.	0.430
lrp5	mesd	ENSCMIP00000037171	ENSCMIP00000007351	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	Uncharacterized protein.	0.504
lrp6	lrpap1	ENSCMIP00000020548	ENSCMIP00000041654	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	Uncharacterized protein.	0.430
lrp6	mesd	ENSCMIP00000020548	ENSCMIP00000007351	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	Uncharacterized protein.	0.504
lrpap1	lrp5	ENSCMIP00000041654	ENSCMIP00000037171	Uncharacterized protein.	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	0.430
lrpap1	lrp6	ENSCMIP00000041654	ENSCMIP00000020548	Uncharacterized protein.	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	0.430
lrpap1	mesd	ENSCMIP00000041654	ENSCMIP00000007351	Uncharacterized protein.	Uncharacterized protein.	0.573
mesd	ablim2	ENSCMIP00000007351	ENSCMIP00000022858	Uncharacterized protein.	Uncharacterized protein.	0.476
mesd	lrp5	ENSCMIP00000007351	ENSCMIP00000037171	Uncharacterized protein.	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	0.504
mesd	lrp6	ENSCMIP00000007351	ENSCMIP00000020548	Uncharacterized protein.	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	0.504
mesd	lrpap1	ENSCMIP00000007351	ENSCMIP00000041654	Uncharacterized protein.	Uncharacterized protein.	0.573
mesd	ostm1	ENSCMIP00000007351	ENSCMIP00000035764	Uncharacterized protein.	Uncharacterized protein.	0.465
mesd	tecpr2	ENSCMIP00000007351	ENSCMIP00000034672	Uncharacterized protein.	Uncharacterized protein.	0.435
ostm1	mesd	ENSCMIP00000035764	ENSCMIP00000007351	Uncharacterized protein.	Uncharacterized protein.	0.465
tecpr2	mesd	ENSCMIP00000034672	ENSCMIP00000007351	Uncharacterized protein.	Uncharacterized protein.	0.435