STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phka1Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. (1192 aa)    
Predicted Functional Partners:
phkg1
Protein kinase domain-containing protein.
   
 0.865
phkb
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
  
0.743
ttc7b
Uncharacterized protein.
      
 0.676
nsf
Uncharacterized protein.
      
 0.641
rcan3
Uncharacterized protein.
      
 0.641
ttc7a
Uncharacterized protein.
      
 0.611
fam126b
Uncharacterized protein.
      
 0.609
calm2
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.517
ENSCMIP00000010084
Uncharacterized protein.
    
 0.517
LOC103191064
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.517
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (36%) [HD]