Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103180236UPF0609 protein C4orf27-like protein isoform 1. (345 aa)    
Predicted Functional Partners:
parp1
Poly [ADP-ribose] polymerase.
    
 
 0.891
parp3
Poly [ADP-ribose] polymerase.
    
 
 0.691
parg
Uncharacterized protein.
      
 0.669
cwc22
MI domain-containing protein.
      
 0.667
gmppb
NTP_transferase domain-containing protein.
   
   0.641
exosc8
Uncharacterized protein.
   
  
 0.627
larp7
Uncharacterized protein.
   
  
 0.625
adprhl2
Uncharacterized protein.
      
 0.625
mrpl54
Uncharacterized protein.
      
 0.526
parp4
Poly [ADP-ribose] polymerase.
    
 
 0.517
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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