STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103190781Uncharacterized protein. (112 aa)    
Predicted Functional Partners:
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.914
cdk5
Protein kinase domain-containing protein.
    
 
 0.722
gsk3b
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.663
snca
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.633
hspa4
Uncharacterized protein.
    
 0.586
stub1
E3 ubiquitin-protein ligase CHIP.
    
 
 0.568
app
BPTI/Kunitz inhibitor domain-containing protein.
   
 
 0.559
gap43
Neuromodulin_N domain-containing protein.
   
 
 0.504
gak
Uncharacterized protein.
   
 
 0.491
caspase-7
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.483
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.