fgfr1op protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

fgfr1op

Uncharacterized protein. (511 aa)

Predicted Functional Partners:

ENSCMIP00000000884

0.979

cep19

0.973

ppp2r3c

0.965

LOC103181714

0.922

cep78

0.918

ENSCMIP00000000880

0.906

mapre1

0.811

LOC103174203

0.807

ppp2ca

0.775

LOC103186729

0.775

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000000880	ENSCMIP00000000884	ENSCMIP00000000880	ENSCMIP00000000884	Uncharacterized protein.	Uncharacterized protein.	0.504
ENSCMIP00000000880	LOC103174203	ENSCMIP00000000880	ENSCMIP00000001574	Uncharacterized protein.	Uncharacterized protein.	0.602
ENSCMIP00000000880	LOC103186729	ENSCMIP00000000880	ENSCMIP00000038178	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.552
ENSCMIP00000000880	cep19	ENSCMIP00000000880	ENSCMIP00000032913	Uncharacterized protein.	Uncharacterized protein.	0.754
ENSCMIP00000000880	cep78	ENSCMIP00000000880	ENSCMIP00000022395	Uncharacterized protein.	Uncharacterized protein.	0.410
ENSCMIP00000000880	fgfr1op	ENSCMIP00000000880	ENSCMIP00000007659	Uncharacterized protein.	Uncharacterized protein.	0.906
ENSCMIP00000000880	mapre1	ENSCMIP00000000880	ENSCMIP00000040142	Uncharacterized protein.	Uncharacterized protein.	0.424
ENSCMIP00000000880	ppp2ca	ENSCMIP00000000880	ENSCMIP00000012288	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.552
ENSCMIP00000000880	ppp2r3c	ENSCMIP00000000880	ENSCMIP00000003491	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma.	0.770
ENSCMIP00000000884	ENSCMIP00000000880	ENSCMIP00000000884	ENSCMIP00000000880	Uncharacterized protein.	Uncharacterized protein.	0.504
ENSCMIP00000000884	LOC103174203	ENSCMIP00000000884	ENSCMIP00000001574	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSCMIP00000000884	LOC103186729	ENSCMIP00000000884	ENSCMIP00000038178	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.742
ENSCMIP00000000884	cep19	ENSCMIP00000000884	ENSCMIP00000032913	Uncharacterized protein.	Uncharacterized protein.	0.901
ENSCMIP00000000884	cep78	ENSCMIP00000000884	ENSCMIP00000022395	Uncharacterized protein.	Uncharacterized protein.	0.558
ENSCMIP00000000884	fgfr1op	ENSCMIP00000000884	ENSCMIP00000007659	Uncharacterized protein.	Uncharacterized protein.	0.979
ENSCMIP00000000884	mapre1	ENSCMIP00000000884	ENSCMIP00000040142	Uncharacterized protein.	Uncharacterized protein.	0.446
ENSCMIP00000000884	ppp2ca	ENSCMIP00000000884	ENSCMIP00000012288	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.742
ENSCMIP00000000884	ppp2r3c	ENSCMIP00000000884	ENSCMIP00000003491	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma.	0.921
LOC103174203	ENSCMIP00000000880	ENSCMIP00000001574	ENSCMIP00000000880	Uncharacterized protein.	Uncharacterized protein.	0.602
LOC103174203	ENSCMIP00000000884	ENSCMIP00000001574	ENSCMIP00000000884	Uncharacterized protein.	Uncharacterized protein.	0.789