rtf1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Cooccurrence

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Experiments

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[Homology]

Score

rtf1

Plus3 domain-containing protein. (580 aa)

Predicted Functional Partners:

leo1

0.999

ctr9

0.997

cdc73

0.996

supt5h

0.983

supt6h

0.964

supt4h1

0.963

cinp

0.961

ENSCMIP00000005553

0.958

paf1

0.958

polr2c

0.933

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000005553	cdc73	ENSCMIP00000005553	ENSCMIP00000046264	Uncharacterized protein.	Uncharacterized protein.	0.982
ENSCMIP00000005553	cinp	ENSCMIP00000005553	ENSCMIP00000034697	Uncharacterized protein.	Cyclin-dependent kinase 2-interacting protein.	0.905
ENSCMIP00000005553	ctr9	ENSCMIP00000005553	ENSCMIP00000008855	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.972
ENSCMIP00000005553	leo1	ENSCMIP00000005553	ENSCMIP00000047145	Uncharacterized protein.	RNA polymerase-associated protein LEO1.	0.999
ENSCMIP00000005553	paf1	ENSCMIP00000005553	ENSCMIP00000007212	Uncharacterized protein.	Uncharacterized protein.	0.946
ENSCMIP00000005553	polr2c	ENSCMIP00000005553	ENSCMIP00000008812	Uncharacterized protein.	RPOLD domain-containing protein.	0.910
ENSCMIP00000005553	rtf1	ENSCMIP00000005553	ENSCMIP00000007709	Uncharacterized protein.	Plus3 domain-containing protein.	0.958
ENSCMIP00000005553	supt4h1	ENSCMIP00000005553	ENSCMIP00000024699	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.869
ENSCMIP00000005553	supt5h	ENSCMIP00000005553	ENSCMIP00000014467	Uncharacterized protein.	Transcription elongation factor SPT5.	0.888
ENSCMIP00000005553	supt6h	ENSCMIP00000005553	ENSCMIP00000043623	Uncharacterized protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.840
cdc73	ENSCMIP00000005553	ENSCMIP00000046264	ENSCMIP00000005553	Uncharacterized protein.	Uncharacterized protein.	0.982
cdc73	cinp	ENSCMIP00000046264	ENSCMIP00000034697	Uncharacterized protein.	Cyclin-dependent kinase 2-interacting protein.	0.973
cdc73	ctr9	ENSCMIP00000046264	ENSCMIP00000008855	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
cdc73	leo1	ENSCMIP00000046264	ENSCMIP00000047145	Uncharacterized protein.	RNA polymerase-associated protein LEO1.	0.999
cdc73	paf1	ENSCMIP00000046264	ENSCMIP00000007212	Uncharacterized protein.	Uncharacterized protein.	0.982
cdc73	polr2c	ENSCMIP00000046264	ENSCMIP00000008812	Uncharacterized protein.	RPOLD domain-containing protein.	0.934
cdc73	rtf1	ENSCMIP00000046264	ENSCMIP00000007709	Uncharacterized protein.	Plus3 domain-containing protein.	0.996
cdc73	supt4h1	ENSCMIP00000046264	ENSCMIP00000024699	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.967
cdc73	supt5h	ENSCMIP00000046264	ENSCMIP00000014467	Uncharacterized protein.	Transcription elongation factor SPT5.	0.969
cdc73	supt6h	ENSCMIP00000046264	ENSCMIP00000043623	Uncharacterized protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.964