Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CabyrRIIa domain-containing protein. (71 aa)    
Predicted Functional Partners:
ropporin-1
Uncharacterized protein.
   
 
 0.745
cep70
Uncharacterized protein.
     
 0.720
spata16
Uncharacterized protein.
      
 0.677
LOC103184469
Cysteinyl leukotriene receptor 1-like protein.
      
 0.658
meig1
Uncharacterized protein.
   
  
 0.637
catip
Uncharacterized protein.
   
 0.603
ccin
BTB domain-containing protein.
   
 0.603
qrich1
Glutamine-rich protein 1-like protein.
    
 0.601
ropn1l
Ropporin-1-like protein.
    
 
 0.590
pkdrej
Uncharacterized protein.
   
 
 0.589
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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