STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myoz1Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
tnnc2
Uncharacterized protein.
   
  
 0.829
myot
Uncharacterized protein.
   
  
 0.758
tcap
Uncharacterized protein.
   
 
 0.749
actn1
Uncharacterized protein.
   
 
 0.680
actn2
Uncharacterized protein.
   
 
 0.680
LOC103190613
Uncharacterized protein.
   
 
 0.680
myom2
Uncharacterized protein.
   
  
 0.679
ampd1
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
  
 0.649
entpd5
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
      
 0.615
LOC103177445
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
  
 0.613
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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