synpo2l protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

synpo2l

Uncharacterized protein. (998 aa)

Predicted Functional Partners:

myoz1

0.566

lias

0.562

ociad2

0.550

ctnna3

0.500

ctnna1

0.500

vcl

0.500

LOC103181503

0.500

LOC103178933

0.500

ctnnal1

0.500

bag3

0.485

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103178933	synpo2l	ENSCMIP00000034581	ENSCMIP00000007754	Uncharacterized protein.	Uncharacterized protein.	0.500
LOC103178933	vcl	ENSCMIP00000034581	ENSCMIP00000020208	Uncharacterized protein.	Uncharacterized protein.	0.685
LOC103181503	ctnna1	ENSCMIP00000029911	ENSCMIP00000015876	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC103181503	ctnna3	ENSCMIP00000029911	ENSCMIP00000000828	Uncharacterized protein.	Uncharacterized protein.	0.902
LOC103181503	synpo2l	ENSCMIP00000029911	ENSCMIP00000007754	Uncharacterized protein.	Uncharacterized protein.	0.500
LOC103181503	vcl	ENSCMIP00000029911	ENSCMIP00000020208	Uncharacterized protein.	Uncharacterized protein.	0.685
bag3	synpo2l	ENSCMIP00000020118	ENSCMIP00000007754	BAG family molecular chaperone regulator 3.	Uncharacterized protein.	0.485
ctnna1	LOC103181503	ENSCMIP00000015876	ENSCMIP00000029911	Uncharacterized protein.	Uncharacterized protein.	0.901
ctnna1	ctnna3	ENSCMIP00000015876	ENSCMIP00000000828	Uncharacterized protein.	Uncharacterized protein.	0.902
ctnna1	synpo2l	ENSCMIP00000015876	ENSCMIP00000007754	Uncharacterized protein.	Uncharacterized protein.	0.500
ctnna1	vcl	ENSCMIP00000015876	ENSCMIP00000020208	Uncharacterized protein.	Uncharacterized protein.	0.685
ctnna3	LOC103181503	ENSCMIP00000000828	ENSCMIP00000029911	Uncharacterized protein.	Uncharacterized protein.	0.902
ctnna3	ctnna1	ENSCMIP00000000828	ENSCMIP00000015876	Uncharacterized protein.	Uncharacterized protein.	0.902
ctnna3	synpo2l	ENSCMIP00000000828	ENSCMIP00000007754	Uncharacterized protein.	Uncharacterized protein.	0.500
ctnna3	vcl	ENSCMIP00000000828	ENSCMIP00000020208	Uncharacterized protein.	Uncharacterized protein.	0.685
ctnnal1	synpo2l	ENSCMIP00000045964	ENSCMIP00000007754	Uncharacterized protein.	Uncharacterized protein.	0.500
ctnnal1	vcl	ENSCMIP00000045964	ENSCMIP00000020208	Uncharacterized protein.	Uncharacterized protein.	0.459
lias	synpo2l	ENSCMIP00000027267	ENSCMIP00000007754	Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.	Uncharacterized protein.	0.562
myoz1	synpo2l	ENSCMIP00000007744	ENSCMIP00000007754	Uncharacterized protein.	Uncharacterized protein.	0.566
ociad2	synpo2l	ENSCMIP00000028256	ENSCMIP00000007754	OCIA domain-containing 2.	Uncharacterized protein.	0.550