Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr89Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
nol8
RRM domain-containing protein.
    
   0.919
gphb5
Cys_knot domain-containing protein.
      
 0.597
tnfaip8l3
Uncharacterized protein.
      
 0.589
sdad1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.563
wdr43
WD_REPEATS_REGION domain-containing protein.
   
    0.560
ttc17
Uncharacterized protein.
      
 0.557
dnlz
DNL-type domain-containing protein.
      
 0.523
ppara-2
C6_DPF domain-containing protein.
      
 0.523
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
   0.510
fance
FA_FANCE domain-containing protein.
   
   0.510
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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