Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sgpp1acidPPc domain-containing protein. (351 aa)    
Predicted Functional Partners:
sgpl1
Uncharacterized protein.
    
 0.992
kdsr
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.965
plpp1
Lipid phosphate phosphohydrolase 1-like protein.
     
 0.963
plpp2
Phosphatidic acid phosphatase type 2C.
     
 0.959
cers6
Uncharacterized protein.
   
 0.949
asah1
Uncharacterized protein; Belongs to the acid ceramidase family.
    
 0.946
LOC103179174
DAGKc domain-containing protein.
    
 0.938
cerk
DAGKc domain-containing protein.
    
 0.938
sgms2
Phosphatidylcholine:ceramide cholinephosphotransferase 2.
     
 0.936
sgms1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
     
 0.936
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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