Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stxbp5lUncharacterized protein. (1125 aa)    
Predicted Functional Partners:
stx2
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.933
snap29
Synaptosomal-associated protein 29.
    
 0.890
vti1b
t-SNARE coiled-coil homology domain-containing protein.
    
 0.889
stx11
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.879
LOC103174480
t-SNARE coiled-coil homology domain-containing protein.
   
 0.857
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.857
stx19
t-SNARE coiled-coil homology domain-containing protein.
    
 0.842
stx7
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.814
stx12
Syntaxin-12; Belongs to the syntaxin family.
    
 0.814
stx8
t-SNARE coiled-coil homology domain-containing protein.
    
 0.753
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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