Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000007894CTCK domain-containing protein. (112 aa)    
Predicted Functional Partners:
ENSCMIP00000038913
Nup214_FG domain-containing protein.
    
 0.604
nup98
Peptidase S59 domain-containing protein.
    
 0.576
nup43
WD_REPEATS_REGION domain-containing protein.
    
 0.569
fau
Ubiquitin-like domain-containing protein.
   
  0.557
nup88
Uncharacterized protein.
    
 0.548
aaas
WD_REPEATS_REGION domain-containing protein.
    
 0.542
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
    
 0.540
nup50
Nuclear pore complex protein Nup50.
     
 0.512
nup35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 0.511
ranbp2
Uncharacterized protein.
   
  0.507
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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