mmd protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mmd

Uncharacterized protein. (234 aa)

Predicted Functional Partners:

katnal2

0.641

radil

0.469

paqr7

0.431

osbpl9

0.403

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
katnal2	mmd	ENSCMIP00000017758	ENSCMIP00000007951	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Uncharacterized protein.	0.641
katnal2	osbpl9	ENSCMIP00000017758	ENSCMIP00000025863	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	Oxysterol-binding protein; Belongs to the OSBP family.	0.598
mmd	katnal2	ENSCMIP00000007951	ENSCMIP00000017758	Uncharacterized protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.641
mmd	osbpl9	ENSCMIP00000007951	ENSCMIP00000025863	Uncharacterized protein.	Oxysterol-binding protein; Belongs to the OSBP family.	0.403
mmd	paqr7	ENSCMIP00000007951	ENSCMIP00000045155	Uncharacterized protein.	Uncharacterized protein.	0.431
mmd	radil	ENSCMIP00000007951	ENSCMIP00000044255	Uncharacterized protein.	Uncharacterized protein.	0.469
osbpl9	katnal2	ENSCMIP00000025863	ENSCMIP00000017758	Oxysterol-binding protein; Belongs to the OSBP family.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.598
osbpl9	mmd	ENSCMIP00000025863	ENSCMIP00000007951	Oxysterol-binding protein; Belongs to the OSBP family.	Uncharacterized protein.	0.403
paqr7	mmd	ENSCMIP00000045155	ENSCMIP00000007951	Uncharacterized protein.	Uncharacterized protein.	0.431
radil	mmd	ENSCMIP00000044255	ENSCMIP00000007951	Uncharacterized protein.	Uncharacterized protein.	0.469