ENSCMIP00000007977 protein (Callorhinchus milii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCMIP00000007977

Uncharacterized protein. (1127 aa)

Predicted Functional Partners:

ENSCMIP00000008020

0.837

ENSCMIP00000031181

0.832

nid2

0.592

nid1

0.592

LOC103190727

0.582

LOC103190194

0.582

lamb2

0.582

LOC103176693

0.577

ENSCMIP00000010271

0.566

Lama3

0.533

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000007977	ENSCMIP00000008020	ENSCMIP00000007977	ENSCMIP00000008020	Uncharacterized protein.	Uncharacterized protein.	0.837
ENSCMIP00000007977	ENSCMIP00000010271	ENSCMIP00000007977	ENSCMIP00000010271	Uncharacterized protein.	Uncharacterized protein.	0.566
ENSCMIP00000007977	ENSCMIP00000031181	ENSCMIP00000007977	ENSCMIP00000031181	Uncharacterized protein.	Uncharacterized protein.	0.832
ENSCMIP00000007977	LOC103176693	ENSCMIP00000007977	ENSCMIP00000048422	Uncharacterized protein.	Uncharacterized protein.	0.577
ENSCMIP00000007977	LOC103190194	ENSCMIP00000007977	ENSCMIP00000010296	Uncharacterized protein.	Uncharacterized protein.	0.582
ENSCMIP00000007977	LOC103190727	ENSCMIP00000007977	ENSCMIP00000005972	Uncharacterized protein.	Uncharacterized protein.	0.582
ENSCMIP00000007977	Lama3	ENSCMIP00000007977	ENSCMIP00000008015	Uncharacterized protein.	Laminin IV type A domain-containing protein.	0.533
ENSCMIP00000007977	lamb2	ENSCMIP00000007977	ENSCMIP00000048741	Uncharacterized protein.	Uncharacterized protein.	0.582
ENSCMIP00000007977	nid1	ENSCMIP00000007977	ENSCMIP00000026652	Uncharacterized protein.	Uncharacterized protein.	0.592
ENSCMIP00000007977	nid2	ENSCMIP00000007977	ENSCMIP00000025630	Uncharacterized protein.	Uncharacterized protein.	0.592
ENSCMIP00000008020	ENSCMIP00000007977	ENSCMIP00000008020	ENSCMIP00000007977	Uncharacterized protein.	Uncharacterized protein.	0.837
ENSCMIP00000008020	ENSCMIP00000010271	ENSCMIP00000008020	ENSCMIP00000010271	Uncharacterized protein.	Uncharacterized protein.	0.566
ENSCMIP00000008020	ENSCMIP00000031181	ENSCMIP00000008020	ENSCMIP00000031181	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSCMIP00000008020	LOC103176693	ENSCMIP00000008020	ENSCMIP00000048422	Uncharacterized protein.	Uncharacterized protein.	0.577
ENSCMIP00000008020	LOC103190194	ENSCMIP00000008020	ENSCMIP00000010296	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSCMIP00000008020	LOC103190727	ENSCMIP00000008020	ENSCMIP00000005972	Uncharacterized protein.	Uncharacterized protein.	0.582
ENSCMIP00000008020	Lama3	ENSCMIP00000008020	ENSCMIP00000008015	Uncharacterized protein.	Laminin IV type A domain-containing protein.	0.847
ENSCMIP00000008020	lamb2	ENSCMIP00000008020	ENSCMIP00000048741	Uncharacterized protein.	Uncharacterized protein.	0.582
ENSCMIP00000008020	nid1	ENSCMIP00000008020	ENSCMIP00000026652	Uncharacterized protein.	Uncharacterized protein.	0.592
ENSCMIP00000008020	nid2	ENSCMIP00000008020	ENSCMIP00000025630	Uncharacterized protein.	Uncharacterized protein.	0.592