irf1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Experiments

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[Homology]

Score

irf1

Interferon regulatory factor. (336 aa)

Predicted Functional Partners:

mdm2

0.934

ep300

0.803

irf2

0.783

myd88

0.764

irf4

0.739

stat1

0.695

irf7

0.688

jun

0.620

crebbp

0.608

Socs1

0.592

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Socs1	irf1	ENSCMIP00000019986	ENSCMIP00000008039	Uncharacterized protein.	Interferon regulatory factor.	0.592
Socs1	myd88	ENSCMIP00000019986	ENSCMIP00000019764	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.444
Socs1	stat1	ENSCMIP00000019986	ENSCMIP00000036547	Uncharacterized protein.	Signal transducer and activator of transcription.	0.639
crebbp	ep300	ENSCMIP00000016551	ENSCMIP00000011493	Uncharacterized protein.	Uncharacterized protein.	0.984
crebbp	irf1	ENSCMIP00000016551	ENSCMIP00000008039	Uncharacterized protein.	Interferon regulatory factor.	0.608
crebbp	irf2	ENSCMIP00000016551	ENSCMIP00000034395	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.402
crebbp	irf4	ENSCMIP00000016551	ENSCMIP00000047874	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.439
crebbp	irf7	ENSCMIP00000016551	ENSCMIP00000046618	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.773
crebbp	jun	ENSCMIP00000016551	ENSCMIP00000047489	Uncharacterized protein.	Jun domain-containing protein.	0.890
crebbp	mdm2	ENSCMIP00000016551	ENSCMIP00000047586	Uncharacterized protein.	RING-type domain-containing protein; Belongs to the MDM2/MDM4 family.	0.660
crebbp	myd88	ENSCMIP00000016551	ENSCMIP00000019764	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.552
crebbp	stat1	ENSCMIP00000016551	ENSCMIP00000036547	Uncharacterized protein.	Signal transducer and activator of transcription.	0.783
ep300	crebbp	ENSCMIP00000011493	ENSCMIP00000016551	Uncharacterized protein.	Uncharacterized protein.	0.984
ep300	irf1	ENSCMIP00000011493	ENSCMIP00000008039	Uncharacterized protein.	Interferon regulatory factor.	0.803
ep300	irf2	ENSCMIP00000011493	ENSCMIP00000034395	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.402
ep300	irf4	ENSCMIP00000011493	ENSCMIP00000047874	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.485
ep300	irf7	ENSCMIP00000011493	ENSCMIP00000046618	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.740
ep300	jun	ENSCMIP00000011493	ENSCMIP00000047489	Uncharacterized protein.	Jun domain-containing protein.	0.934
ep300	mdm2	ENSCMIP00000011493	ENSCMIP00000047586	Uncharacterized protein.	RING-type domain-containing protein; Belongs to the MDM2/MDM4 family.	0.846
ep300	myd88	ENSCMIP00000011493	ENSCMIP00000019764	Uncharacterized protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.532