Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
setd6SET domain-containing protein. (192 aa)    
Predicted Functional Partners:
rel
RHD domain-containing protein.
    
 0.827
ENSCMIP00000010499
RHD domain-containing protein.
    
 0.827
LOC103171730
IPT/TIG domain-containing protein.
    
 0.827
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
    0.752
Pou2af1
ANK_REP_REGION domain-containing protein.
    
 0.670
setd4
SET domain-containing protein.
    
 
 0.589
mrps23
MRP-S23 domain-containing protein.
      
 0.582
LOC103182230
Uncharacterized protein.
    
  0.563
nfkb1
Uncharacterized protein.
    
  0.563
gamt
RMT2 domain-containing protein.
   
  
 0.542
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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