polq protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

polq

Uncharacterized protein. (2364 aa)

Predicted Functional Partners:

fancm

0.774

fancd2

0.703

exo1

0.664

mre11

0.658

LOC103173653

0.636

rad50

0.616

ENSCMIP00000003165

0.614

neil3

0.605

parp1

0.602

fanci

0.599

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000003165	LOC103173653	ENSCMIP00000003165	ENSCMIP00000003658	Uncharacterized protein.	Uncharacterized protein.	0.937
ENSCMIP00000003165	exo1	ENSCMIP00000003165	ENSCMIP00000047918	Uncharacterized protein.	Uncharacterized protein.	0.829
ENSCMIP00000003165	fancd2	ENSCMIP00000003165	ENSCMIP00000044138	Uncharacterized protein.	Uncharacterized protein.	0.404
ENSCMIP00000003165	fancm	ENSCMIP00000003165	ENSCMIP00000005855	Uncharacterized protein.	Uncharacterized protein.	0.883
ENSCMIP00000003165	mre11	ENSCMIP00000003165	ENSCMIP00000030008	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.927
ENSCMIP00000003165	neil3	ENSCMIP00000003165	ENSCMIP00000005403	Uncharacterized protein.	Uncharacterized protein.	0.649
ENSCMIP00000003165	parp1	ENSCMIP00000003165	ENSCMIP00000013962	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.760
ENSCMIP00000003165	polq	ENSCMIP00000003165	ENSCMIP00000008114	Uncharacterized protein.	Uncharacterized protein.	0.614
ENSCMIP00000003165	rad50	ENSCMIP00000003165	ENSCMIP00000043048	Uncharacterized protein.	Zinc-hook domain-containing protein.	0.883
LOC103173653	ENSCMIP00000003165	ENSCMIP00000003658	ENSCMIP00000003165	Uncharacterized protein.	Uncharacterized protein.	0.937
LOC103173653	exo1	ENSCMIP00000003658	ENSCMIP00000047918	Uncharacterized protein.	Uncharacterized protein.	0.829
LOC103173653	fancd2	ENSCMIP00000003658	ENSCMIP00000044138	Uncharacterized protein.	Uncharacterized protein.	0.465
LOC103173653	fancm	ENSCMIP00000003658	ENSCMIP00000005855	Uncharacterized protein.	Uncharacterized protein.	0.883
LOC103173653	mre11	ENSCMIP00000003658	ENSCMIP00000030008	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.927
LOC103173653	neil3	ENSCMIP00000003658	ENSCMIP00000005403	Uncharacterized protein.	Uncharacterized protein.	0.734
LOC103173653	parp1	ENSCMIP00000003658	ENSCMIP00000013962	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.799
LOC103173653	polq	ENSCMIP00000003658	ENSCMIP00000008114	Uncharacterized protein.	Uncharacterized protein.	0.636
LOC103173653	rad50	ENSCMIP00000003658	ENSCMIP00000043048	Uncharacterized protein.	Zinc-hook domain-containing protein.	0.883
exo1	ENSCMIP00000003165	ENSCMIP00000047918	ENSCMIP00000003165	Uncharacterized protein.	Uncharacterized protein.	0.829
exo1	LOC103173653	ENSCMIP00000047918	ENSCMIP00000003658	Uncharacterized protein.	Uncharacterized protein.	0.829